🧬

BioAgent

UCI RUIC20 lab · single-cell research console

No account? Ask a lab admin to create one. Forgot your password? An admin can reset it.

🧬

BioAgent Console

SSH → UCI HPC3 · GPU · vLLM / Qwen3

Disconnected

Connect to HPC3

Provisioning

  • SSH login
  • vLLM detect / image
  • GPU allocation (Slurm)
  • vLLM serve + tunnel
  • Model ready
  • Live
connected
GPU —

Step 2 · Duo


                
                

Chats

New chat

Connect to a GPU-backed Qwen3 on HPC3, then ask a research question.
Advanced — force a research path (the PI chooses by default)
Optional — the PI auto-selects the right protocol. To change the plan, just tell the PI in the chat below (plan-first lets you review and refine it before any tool runs).

Downloads

Run a pipeline to get a notebook (.ipynb) and a results bundle (.zip) here.

Event & error log

My datasets

Files you've uploaded to the server. Click "Use" to load one into a Research run.

Loading…

My runs

Past research-lab runs. Open one to browse its figures, tables, report, and bundle.

Loading…

User management

Create accounts, disable/enable them, or reset a forgotten password. Admin only.

IDUsernameRoleStatusLast loginActions
Loading…

My account

Change my password

System

What this BioAgent defines and what this server can actually run — generated live from the code.

Workflow graph (live — reflects the current code)

Loading…
Click a node to see its details.
Loading…

HPC3 storage

Total used: —

      
Loading…

Deletes run rm -rf on HPC3, scoped to your own directory only. This cannot be undone.

Preview

⬇ Download